In this video, I will share a novel bioinformatics dataset. I have compiled a collection of bioactivity datasets from the ChEMBL (version 29) database. Particularly, there are 136 CSV files belonging to 136 variants of the Beta-Lactamase target protein. I also provide a high-level overview of the dataset as well as my thoughts on some of the analysis that you can perform and contribute to this Open Bioinformatics Research Project.
You can think of this as sort of like a Hacktoberfest! Let’s work on this and learn together!
Contribute to this Open Bioinformatics Research Project
👉 GitHub https://github.com/dataprofessor/beta-lactamase
👉 Kaggle https://www.kaggle.com/thedataprof/betalactamase
Prerequisite knowledge
👉 An Introduction to Computational Drug Discovery https://youtu.be/RL25hgfLd8Q
👉 How to use PaDelPy to calculate molecular descriptors/fingerprints from SMILES notation https://youtu.be/rEmDyZHz5U8
👉 Playlist of Bioinformatics videos https://www.youtube.com/watch?v=plVLRashaA8&list=PLtqF5YXg7GLlQJUv9XJ3RWdd5VYGwBHrP
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